BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003E01LP1|AL425126
(1085 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig251 1729 0.0
3x_Contig943 286 6e-77
>3x_Contig251
Length = 1124
Score = 1729 bits (870), Expect = 0.0
Identities = 875/877 (99%)
Strand = Plus / Plus
Query: 1 gatcaaagattccaaaaggatgaagtaggtatccttgttttcatcgtaaatcttgacgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gatcaaagattccaaaaggatgaagtaggtatccttgttttcatcgtaaatcttgacgta 307
Query: 61 ttcgaactcaggattgacacataatgccaagttagatggtaaagtccaaggggtagtagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ttcgaactcaggattgacacataatgccaagttagatggtaaagtccaaggggtagtagt 367
Query: 121 ccaagcaacaagtttagtcttttcttgaccaataacgttgaatgcaatgntaattgcagg 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 368 ccaagcaacaagtttagtcttttcttgaccaataacgttgaatgcaatggtaattgcagg 427
Query: 181 atcattgacgtccttatagttttgttgagcttcaaagttactcaatggggtggtacaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 atcattgacgtccttatagttttgttgagcttcaaagttactcaatggggtggtacaacc 487
Query: 241 ggtcgaataaggcataactttgtaaccacggtaaacttggtccttgtcaaataattcctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ggtcgaataaggcataactttgtaaccacggtaaacttggtccttgtcaaataattcctt 547
Query: 301 gaacgcccaccagatagattccatgaaagttggatacattgtcttgtaatcgtcatcgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 gaacgcccaccagatagattccatgaaagttggatacattgtcttgtaatcgtcatcgaa 607
Query: 361 atcaatccaacgacctaaacggccgatagtctttctccattcctcagcgtaagtggaaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 atcaatccaacgacctaaacggccgatagtctttctccattcctcagcgtaagtggaaac 667
Query: 421 aatagccctacattcattgttatagttgtcgataccgaatgcatacacatcctccttaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 aatagccctacattcattgttatagttgtcgataccgaatgcatacacatcctccttaca 727
Query: 481 ggtgatgttcagtttcttgtcaatgatgtgttcaattggcaaaccatgtgtatcccaacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 ggtgatgttcagtttcttgtcaatgatgtgttcaattggcaaaccatgtgtatcccaacc 787
Query: 541 gaatcttctttcaacgtgatgtcctgtcatggtagcatatcttggaacgatatctttcac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 gaatcttctttcaacgtgatgtcctgtcatggtagcatatcttggaacgatatctttcac 847
Query: 601 agtggacgctagcaagtgaccatagtggggagtaccagtagcgaatggaggaccatcgaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 agtggacgctagcaagtgaccatagtggggagtaccagtagcgaatggaggaccatcgaa 907
Query: 661 gaaggagaattcaggcttatcttcagtaagcttcaaagaagtatggaaagcatcaatttc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 gaaggagaattcaggcttatcttcagtaagcttcaaagaagtatggaaagcatcaatttc 967
Query: 721 attccagaaggctaagactttctcttcctcttccgggaaagagaaataagtgttaccttc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 968 attccagaaggctaagactttctcttcctcttccgggaaagagaaataagtgttaccttc 1027
Query: 781 ggcagccattttctctcttaattataagatagaaagtgatgtgtcgtttgcttaacttga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1028 ggcagccattttctctcttaattataagatagaaagtgatgtgtcgtttgcttaacttga 1087
Query: 841 tcacagcttgcaaaagcttacagaaaaggtttatgga 877
||||||||||||||| |||||||||||||||||||||
Sbjct: 1088 tcacagcttgcaaaaccttacagaaaaggtttatgga 1124
>3x_Contig943
Length = 2708
Score = 286 bits (144), Expect = 6e-77
Identities = 185/194 (95%), Gaps = 5/194 (2%)
Strand = Plus / Minus
Query: 858 ttacagaaaaggtttatggacgaacgaaagtattttgtgacataaaactacgctatttca 917
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2704 ttacagaaaaggtttatggacgaacgtaagtattttgtgacataaaactacgctatttca 2645
Query: 918 aatcaactagagctttttcgaatccgtttagagtcatagttt-cmatcgattccagagtt 976
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 2644 aatcaactagagctttttcgaatccgtttagagtcatagtttccaatcgattccagagtt 2585
Query: 977 cgaatttttc-aaaawtatcaaag-ygtcaaacgtgatatgtcttgctgt-acatgatat 1033
|||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 2584 cgaatttttcaaaaattatcaaagtcgtcaaacgtgatatgtcttgctgtcacatgatat 2525
Query: 1034 c-aaattatcttaa 1046
| ||||||||||||
Sbjct: 2524 caaaattatcttaa 2511
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7904
Number of Sequences: 1807
Number of extensions: 7904
Number of successful extensions: 62
Number of sequences better than 1.0e-20: 2
length of query: 1085
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1069
effective length of database: 10,329,639
effective search space: 11042384091
effective search space used: 11042384091
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)